Publications Ylli Doksani
- Ylli Doksani, Francisca Lottersberger
The risky business of ADP-ribosylating telomeric DNA
Nat Struct Mol Biol. 2024 May;31(5):737-738. doi: 10.1038/s41594-024-01285-8. - Nagham Ghaddar, Yves Corda, Pierre Luciano, Martina Galli, Ylli Doksani, Vincent Géli
The COMPASS subunit Spp1 protects nascent DNA at the Tus/Ter replication fork barrier by limiting DNA availability to nucleases
Nat Commun. 2023 Sep 5;14(1):5430. doi: 10.1038/s41467-023-41100-4. - Huda, A., Arakawa, H., Mazzucco, G., Galli, M., Petrocelli, V., Casola, S., Chen, L., and Doksani, Y. (2023).
The telomerase reverse transcriptase elongates reversed replication forks at telomeric repeats.
Sci Adv. 2023 Mar 22;9(12):eadf2011. doi: 10.1126/sciadv.adf2011. Epub 2023 Mar 22. - Garribba, L., De Feudis, G., Martis, V., Galli, M., Dumont, M., Eliezer, Y., Wardenaar, R., Ippolito, M. R., Iyer, D. R., Tijhuis, A. E., Spierings, D. C. J., Schubert, M., Taglietti, S., Soriani, C., Gemble, S., Basto, R., Rhind, N., Foijer, F., Ben-David, U., Fachinetti, D., Doksani, Y., and Santaguida, S. (2023).
Short-term molecular consequences of chromosome mis-segregation for genome stability.
Nat Commun 14, 1353. - Pessina, F., Romussi, A., Piccini, D., Mazzucco, G, Varasi, M., and Doksani, Y. (2022).
Enrichment of DNA replication intermediates by EdU pull down.
Methods in Cell Biology - Riccardo Gamba, Giulia Mazzucco, Therese Wilhelm, Leonid Velikovsky, Catalina Salinas-Luypaert, Florian Chardon, Julien Picotto, Mylène Bohec, Sylvain Baulande, Ylli Doksani, Daniele Fachinetti
Enrichment of centromeric DNA from human cells
PMID: 35853083 PMCID: PMC9295943 DOI: 10.1371/journal.pgen.1010306 - Giulia Mazzucco, Armela Huda, Martina Galli, Elia Zanella & Ylli Doksani
Purification of mammalian telomeric DNA for single-molecule analysis
Nat Protoc (2022). - Giulia Mazzucco, Armela Huda, Martina Galli, Daniele Piccini, Michele Giannattasio, Fabio Pessina & Ylli Doksani
Telomere damage induces internal loops that generate telomeric circles
Nature Communications volume 11, Article number: 5297 (2020) - Ylli Doksani
The Response to DNA Damage at Telomeric Repeats and Its Consequences for Telomere Function
Genes (Basel). 2019 Apr 24;10(4):318. doi: 10.3390/genes10040318. PMID: 31022960 PMCID: PMC6523756 DOI: 10.3390/genes10040318 - Ylli Doksani and Titia de Lange
Telomere-Internal Double-Strand Breaks Are Repaired by Homologous Recombination and PARP1/Lig3-Dependent End-Joining
Cell Reports, Volume 17, Issue 6, 1 November 2016, Pages 1646-1656 - Doksani Y, de Lange T
The role of double-strand break repair pathways at functional and dysfunctional telomeres.
Cold Spring Harb Perspect Biol. 2014 Sep 16;6(12):a016576. doi: 10.1101/cshperspect.a016576. - Doksani Y, Wu JY, de Lange T, Zhuang X.
Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Cell. 2013 Oct 10;155(2):345-56. doi: 10.1016/j.cell.2013.09.048. - Bermejo R, Capra T, Jossen R, Colosio A, Frattini C, Carotenuto W, Cocito A, Doksani Y, Klein H, Gómez-González B, Aguilera A, Katou Y, Shirahige K, Foiani
The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores.
M. Cell. 2011 Jul 22;146(2):233-46. doi: 10.1016/j.cell.2011.06.033. - Doksani Y, Bermejo R, Fiorani S, Haber JE, Foiani M
Replicon dynamics, dormant origin firing, and terminal fork integrity after double-strand break formation.
Cell. 2009 Apr 17;137(2):247-58. doi: 10.1016/j.cell.2009.02.016. Epub 2009 Apr 9. - Bermejo R, Doksani Y, Capra T, Katou YM, Tanaka H, Shirahige K, Foiani M.
Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation.
Genes Dev. 2007 Aug 1;21(15):1921-36. - Cotta-Ramusino C, Fachinetti D, Lucca C, Doksani Y, Lopes M, Sogo J, Foiani M.
Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells.
Mol Cell. 2005 Jan 7;17(1):153-9.
